Data Analysis Made Simple
End-to-end RNA-Seq Analysis in Avadis NGS
The webinar will describe how to use Avadis NGS for end-to-end RNA-Seq analysis workflow including:
- Alignment: support for alignment of Ion Torrent single-end or paired-end reads against a transcriptome or genome reference.
- Quality Control: quality control plots and filters steps to ensure read quality.
- Analysis: quantification of known and novel transcripts, differential splicing analysis, variant detection, gene fusions, and more.
- Biological Contextualization: ability to investigate set of interesting genes for GO enrichment, network and pathway analysis.
Avadis NGS is an integrated platform that provides analysis, management and visualization tools for next-generation sequencing data.
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